STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_3320PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_6967 ABC transporter related. (331 aa)    
Predicted Functional Partners:
Xcel_3319
PFAM: ABC-2 type transporter; KEGG: sus:Acid_6966 ABC-2 type transporter.
 
    0.958
Xcel_3323
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bcz:BCZK2634 GntR family transcriptional regulator.
  
    0.718
Xcel_3322
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH3493 ABC transporter ATP-binding protein.
 
    
0.703
Xcel_3321
KEGG: hypothetical protein.
       0.675
Xcel_2803
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_C6690 ABC transporter, ATPase subunit.
 
    
0.670
Xcel_0608
PFAM: ABC-2 type transporter; KEGG: mxa:MXAN_1598 ABC transporter, permease protein, ABC-2 family.
  
 0.653
Xcel_1354
PFAM: ABC-2 type transporter; KEGG: scl:sce5572 putative integral membrane transport protein.
 
  
 0.614
Xcel_3137
PFAM: ABC-2 type transporter; KEGG: aeh:Mlg_2716 ABC-2 type transporter.
 
    0.515
Xcel_1351
PFAM: ABC-2 type transporter; KEGG: rsq:Rsph17025_3253 ABC transporter related.
  
 0.509
Xcel_0418
PFAM: ABC-2 type transporter; KEGG: bcb:BCB4264_A2507 putative ABC transporter, permease protein.
  
 0.502
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.