STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_3361TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bcr:BCAH187_A1115 drug resistance transporter, EmrB/QacA family. (492 aa)    
Predicted Functional Partners:
Xcel_0952
4-phytase; PFAM: extracellular solute-binding protein family 5; KEGG: hch:HCH_01127 ABC-type oligopeptide transport system, periplasmic component.
   
    0.624
Xcel_3360
PFAM: major facilitator superfamily MFS_1; KEGG: gsu:GSU0752 transporter, putative.
       0.588
Xcel_1851
4-phytase; PFAM: extracellular solute-binding protein family 5; KEGG: bcz:BCZK1683 oligopeptide ABC transporter, oligopeptide-binding protein, OppA-like.
   
    0.493
Xcel_3091
PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; nucleic acid binding OB-fold tRNA/helicase-type; Endonuclease/exonuclease/phosphatase; Carbohydrate-binding family V/XII; SMART: Carbohydrate-binding family V/XII; KEGG: rpb:RPB_0803 5'-nucleotidase.
 
   
 0.482
Xcel_0384
PFAM: protein of unknown function DUF808; KEGG: csa:Csal_0752 protein of unknown function DUF808.
      
 0.412
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.