STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_3368TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: zmo:ZMO1142 thioredoxin reductase. (330 aa)    
Predicted Functional Partners:
Xcel_3369
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: predicted protein; K03671 thioredoxin 1; Belongs to the thioredoxin family.
 
 0.998
Xcel_1361
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
  0.918
Xcel_1065
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: azo:azo3700 thioredoxin-disulfide reductase; Belongs to the thioredoxin family.
 
 
 0.916
Xcel_2422
PFAM: Tetratricopeptide TPR_2 repeat protein; Thioredoxin domain; KEGG: trx; thioredoxin; K05838 putative thioredoxin.
  
 
 0.867
Xcel_3032
KEGG: eca:ECA1555 hypothetical protein.
  
 
 0.715
Xcel_3367
KEGG: similar to MGC139263 protein.
 
    0.713
Xcel_0444
PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: scl:sce9086 thioredoxin family protein.
 
 
 0.636
Xcel_3365
PFAM: virulence factor MVIN family protein; KEGG: rsp:RSP_1810 putative virulence factor, MviN.
     
 0.612
Xcel_3364
Hypothetical protein; KEGG: GH15499 gene product from transcript GH15499- RA.
       0.587
Xcel_1459
PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: hch:HCH_02851 molybdopterin/thiamine biosynthesis family protein.
  
  
 0.580
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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