node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Xcel_2278 | Xcel_3377 | Xcel_2278 | Xcel_3377 | TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative; KEGG: met:M446_6054 methyltransferase. | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.698 |
Xcel_2278 | rnpA | Xcel_2278 | Xcel_3378 | TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative; KEGG: met:M446_6054 methyltransferase. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.493 |
Xcel_3375 | Xcel_3376 | Xcel_3375 | Xcel_3376 | PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; KEGG: bha:BH4063 spoIIIJ-associated protein. | PFAM: 60 kDa inner membrane insertion protein; KEGG: bha:BH1169 stage III sporulation protein J. | 0.985 |
Xcel_3375 | Xcel_3377 | Xcel_3375 | Xcel_3377 | PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; KEGG: bha:BH4063 spoIIIJ-associated protein. | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.894 |
Xcel_3375 | rho | Xcel_3375 | Xcel_2462 | PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; KEGG: bha:BH4063 spoIIIJ-associated protein. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.707 |
Xcel_3375 | rnpA | Xcel_3375 | Xcel_3378 | PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; KEGG: bha:BH4063 spoIIIJ-associated protein. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.902 |
Xcel_3375 | rplB | Xcel_3375 | Xcel_0630 | PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; KEGG: bha:BH4063 spoIIIJ-associated protein. | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.684 |
Xcel_3375 | rpmH | Xcel_3375 | Xcel_3379 | PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; KEGG: bha:BH4063 spoIIIJ-associated protein. | TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; KEGG: sus:Acid_1093 50S ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family. | 0.732 |
Xcel_3375 | rsmG | Xcel_3375 | Xcel_3374 | PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; KEGG: bha:BH4063 spoIIIJ-associated protein. | Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.922 |
Xcel_3376 | Xcel_3375 | Xcel_3376 | Xcel_3375 | PFAM: 60 kDa inner membrane insertion protein; KEGG: bha:BH1169 stage III sporulation protein J. | PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; KEGG: bha:BH4063 spoIIIJ-associated protein. | 0.985 |
Xcel_3376 | Xcel_3377 | Xcel_3376 | Xcel_3377 | PFAM: 60 kDa inner membrane insertion protein; KEGG: bha:BH1169 stage III sporulation protein J. | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.942 |
Xcel_3376 | rho | Xcel_3376 | Xcel_2462 | PFAM: 60 kDa inner membrane insertion protein; KEGG: bha:BH1169 stage III sporulation protein J. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.769 |
Xcel_3376 | rnpA | Xcel_3376 | Xcel_3378 | PFAM: 60 kDa inner membrane insertion protein; KEGG: bha:BH1169 stage III sporulation protein J. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.954 |
Xcel_3376 | rplB | Xcel_3376 | Xcel_0630 | PFAM: 60 kDa inner membrane insertion protein; KEGG: bha:BH1169 stage III sporulation protein J. | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.732 |
Xcel_3376 | rpmH | Xcel_3376 | Xcel_3379 | PFAM: 60 kDa inner membrane insertion protein; KEGG: bha:BH1169 stage III sporulation protein J. | TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; KEGG: sus:Acid_1093 50S ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family. | 0.904 |
Xcel_3376 | rsmG | Xcel_3376 | Xcel_3374 | PFAM: 60 kDa inner membrane insertion protein; KEGG: bha:BH1169 stage III sporulation protein J. | Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.857 |
Xcel_3376 | secE | Xcel_3376 | Xcel_0610 | PFAM: 60 kDa inner membrane insertion protein; KEGG: bha:BH1169 stage III sporulation protein J. | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.978 |
Xcel_3377 | Xcel_2278 | Xcel_3377 | Xcel_2278 | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative; KEGG: met:M446_6054 methyltransferase. | 0.698 |
Xcel_3377 | Xcel_3375 | Xcel_3377 | Xcel_3375 | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; KEGG: bha:BH4063 spoIIIJ-associated protein. | 0.894 |
Xcel_3377 | Xcel_3376 | Xcel_3377 | Xcel_3376 | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | PFAM: 60 kDa inner membrane insertion protein; KEGG: bha:BH1169 stage III sporulation protein J. | 0.942 |