STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALU38793.1Glycoside hydrolase family 15; Derived by automated computational analysis using gene prediction method: Protein Homology. (667 aa)    
Predicted Functional Partners:
ALU39450.1
Trehalose phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
 0.973
ALU39451.1
Trehalose-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.853
treZ
Malto-oligosyltrehalose trehalohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.672
zwf_1
Glucose-6-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.626
ALU39441.1
Trehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.623
ALU40644.1
Maltooligosyl trehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.576
glgB
Glycogen branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
  
 0.516
Your Current Organism:
Kocuria flava
NCBI taxonomy Id: 446860
Other names: CCTCC AB 206106, JCM 15621, KCTC 19306, Kocuria flava Zhou et al. 2008, Kocuria sp. HO-9041, strain HO-9041
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