STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALU41088.1Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (608 aa)    
Predicted Functional Partners:
ALU39355.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.598
ALU39354.1
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
       0.596
ALU39356.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.513
ALU40982.1
Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.498
ALU40862.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.498
ALU40314.1
Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.492
ALU41327.1
Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.492
ALU38906.1
Heavy metal transport/detoxification protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.481
Your Current Organism:
Kocuria flava
NCBI taxonomy Id: 446860
Other names: CCTCC AB 206106, JCM 15621, KCTC 19306, Kocuria flava Zhou et al. 2008, Kocuria sp. HO-9041, strain HO-9041
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