STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Cooccurrence
Coexpression
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[Homology]
Score
ALU39828.1Involved in the transport of C4-dicarboxylates across the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (462 aa)    
Predicted Functional Partners:
ALU39827.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.846
ALU39826.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.790
ALU39537.1
Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.580
ALU39831.1
Segregation and condensation protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.484
ALU39829.1
Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.477
ALU39830.1
Chromosome segregation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
       0.469
ALU41002.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.435
ALU38783.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.429
ALU39930.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.428
AS188_15450
Choline transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.415
Your Current Organism:
Kocuria flava
NCBI taxonomy Id: 446860
Other names: CCTCC AB 206106, JCM 15621, KCTC 19306, Kocuria flava Zhou et al. 2008, Kocuria sp. HO-9041, strain HO-9041
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