Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDB0218282 | gol | Q54UG0 | O60950 | SAP domain-containing protein. | Golvesin. | 0.447 |
EnlA | gol | Q75JH9 | O60950 | Fimbrin. | Golvesin. | 0.402 |
ampA | gol | P05817 | O60950 | Prestalk D11 protein. | Golvesin. | 0.448 |
cnxA | gol | Q55BA8 | O60950 | Uncharacterized protein. | Golvesin. | 0.403 |
cnxA | gppA | Q55BA8 | Q06885 | Uncharacterized protein. | Glycoprotein gp100. | 0.402 |
fimA | gol | P54680 | O60950 | Fimbrin; Binds to actin. | Golvesin. | 0.400 |
gol | DDB0218282 | O60950 | Q54UG0 | Golvesin. | SAP domain-containing protein. | 0.447 |
gol | EnlA | O60950 | Q75JH9 | Golvesin. | Fimbrin. | 0.402 |
gol | ampA | O60950 | P05817 | Golvesin. | Prestalk D11 protein. | 0.448 |
gol | cnxA | O60950 | Q55BA8 | Golvesin. | Uncharacterized protein. | 0.403 |
gol | fimA | O60950 | P54680 | Golvesin. | Fimbrin; Binds to actin. | 0.400 |
gol | gppA | O60950 | Q06885 | Golvesin. | Glycoprotein gp100. | 0.700 |
gol | hexb2 | O60950 | Q54K56 | Golvesin. | Beta-hexosaminidase subunit B2; Responsible for the degradation of GM2 gangliosides, and a variety of other molecules containing terminal N-acetyl hexosamines. | 0.406 |
gol | lmpA | O60950 | Q9XYS8 | Golvesin. | Lysosome membrane protein 2-A; May act as a lysosomal receptor (By similarity). May be involved in macropinocytosis and fluid phase exocytosis. Binds to the anionic phospholipid phosphoinositol 4,5-bisphosphate, but not to phosphatidylcholine and only weakly to phosphatidylserine. Belongs to the CD36 family. | 0.442 |
gol | pdiA | O60950 | P22549 | Golvesin. | Cyclic nucleotide phosphodiesterase inhibitor; PDI acts by binding stoichiometrically to cyclic nucleotide phosphodiesterase, changing the KM of the enzyme for cAMP from 10 uM to 2 mM. | 0.402 |
gol | pefA | O60950 | Q95YL5 | Golvesin. | Penta-EF hand domain-containing protein 1; Belongs to the Peflin/Sorcin family. | 0.404 |
gppA | cnxA | Q06885 | Q55BA8 | Glycoprotein gp100. | Uncharacterized protein. | 0.402 |
gppA | gol | Q06885 | O60950 | Glycoprotein gp100. | Golvesin. | 0.700 |
hexb2 | gol | Q54K56 | O60950 | Beta-hexosaminidase subunit B2; Responsible for the degradation of GM2 gangliosides, and a variety of other molecules containing terminal N-acetyl hexosamines. | Golvesin. | 0.406 |
hexb2 | pdiA | Q54K56 | P22549 | Beta-hexosaminidase subunit B2; Responsible for the degradation of GM2 gangliosides, and a variety of other molecules containing terminal N-acetyl hexosamines. | Cyclic nucleotide phosphodiesterase inhibitor; PDI acts by binding stoichiometrically to cyclic nucleotide phosphodiesterase, changing the KM of the enzyme for cAMP from 10 uM to 2 mM. | 0.403 |
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