STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDB0219877Uncharacterized protein; Belongs to the synaptobrevin family. (187 aa)    
Predicted Functional Partners:
vti1A
Vesicle transport through interaction with t-SNAREs homolog 1A; V-SNARE that mediates vesicle transport pathways through interactions with t-SNAREs on the target membrane. These interactions are proposed to mediate aspects of the specificity of vesicle trafficking and to promote fusion of the lipid bilayers. Belongs to the VTI1 family.
    
 0.981
Vti1B
Uncharacterized protein.
   
 0.981
DDB_G0282433
t-SNARE coiled-coil homology domain-containing protein.
    
 0.978
syn5
t-SNARE family protein.
    
 0.978
syn8B
Probable syntaxin-8B.
    
 0.955
DDB0202238
Uncharacterized protein.
   
 0.951
DDB0185714
Uncharacterized protein.
    
 0.947
DDB_G0269942
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 0.946
scfd1
Sec1 family domain-containing protein 1 homolog; Involved in vesicular transport between the endoplasmic reticulum and the Golgi; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.936
snpA
Alpha-soluble NSF attachment protein; May be required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus (By similarity). Involved in vesicle fusion with nsfA and probably SNARE proteins; Belongs to the SNAP family.
    
 0.926
Your Current Organism:
Dictyostelium discoideum
NCBI taxonomy Id: 44689
Other names: D. discoideum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.