Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDB0186711 | DDB0216710 | Q54MM7 | Q55D33 | DNA primase; Belongs to the eukaryotic-type primase small subunit family. | Uncharacterized protein. | 0.512 |
DDB0186711 | pcna | Q54MM7 | Q54K47 | DNA primase; Belongs to the eukaryotic-type primase small subunit family. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand. | 0.958 |
DDB0186711 | pole | Q54MM7 | Q54RD4 | DNA primase; Belongs to the eukaryotic-type primase small subunit family. | DNA polymerase epsilon catalytic subunit A; DNA polymerase II participates in chromosomal DNA replication. | 0.967 |
DDB0186711 | prim2 | Q54MM7 | Q55BM5 | DNA primase; Belongs to the eukaryotic-type primase small subunit family. | DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication. | 0.999 |
DDB0186711 | rnaseh2A | Q54MM7 | Q54D13 | DNA primase; Belongs to the eukaryotic-type primase small subunit family. | Ribonuclease H2 subunit A; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. Participates in DNA replication (By similarity). | 0.798 |
DDB0186711 | top1 | Q54MM7 | Q54RC3 | DNA primase; Belongs to the eukaryotic-type primase small subunit family. | DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)- enzyme intermediate and the expulsion of a 5'-OH DNA strand. TThe free DNA strand then rotates around the intact phosphodiester bond on the opposing strand, thus rem [...] | 0.759 |
DDB0216710 | DDB0186711 | Q55D33 | Q54MM7 | Uncharacterized protein. | DNA primase; Belongs to the eukaryotic-type primase small subunit family. | 0.512 |
DDB0216710 | DDB0217507 | Q55D33 | Q8T145 | Uncharacterized protein. | Uncharacterized protein. | 0.654 |
DDB0216710 | DDB0220051 | Q55D33 | Q54AP7 | Uncharacterized protein. | RNase H domain-containing protein. | 0.489 |
DDB0216710 | pcna | Q55D33 | Q54K47 | Uncharacterized protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand. | 0.817 |
DDB0216710 | pole | Q55D33 | Q54RD4 | Uncharacterized protein. | DNA polymerase epsilon catalytic subunit A; DNA polymerase II participates in chromosomal DNA replication. | 0.514 |
DDB0216710 | rnaseh2A | Q55D33 | Q54D13 | Uncharacterized protein. | Ribonuclease H2 subunit A; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. Participates in DNA replication (By similarity). | 0.976 |
DDB0216710 | top1 | Q55D33 | Q54RC3 | Uncharacterized protein. | DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)- enzyme intermediate and the expulsion of a 5'-OH DNA strand. TThe free DNA strand then rotates around the intact phosphodiester bond on the opposing strand, thus rem [...] | 0.559 |
DDB0217507 | DDB0216710 | Q8T145 | Q55D33 | Uncharacterized protein. | Uncharacterized protein. | 0.654 |
DDB0217507 | DDB0220051 | Q8T145 | Q54AP7 | Uncharacterized protein. | RNase H domain-containing protein. | 0.523 |
DDB0217507 | pcna | Q8T145 | Q54K47 | Uncharacterized protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand. | 0.994 |
DDB0217507 | pole | Q8T145 | Q54RD4 | Uncharacterized protein. | DNA polymerase epsilon catalytic subunit A; DNA polymerase II participates in chromosomal DNA replication. | 0.895 |
DDB0217507 | rnaseh2A | Q8T145 | Q54D13 | Uncharacterized protein. | Ribonuclease H2 subunit A; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. Participates in DNA replication (By similarity). | 0.752 |
DDB0217507 | top1 | Q8T145 | Q54RC3 | Uncharacterized protein. | DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)- enzyme intermediate and the expulsion of a 5'-OH DNA strand. TThe free DNA strand then rotates around the intact phosphodiester bond on the opposing strand, thus rem [...] | 0.769 |
DDB0220051 | DDB0216710 | Q54AP7 | Q55D33 | RNase H domain-containing protein. | Uncharacterized protein. | 0.489 |
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