STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDB0184126F-box domain-containing protein. (336 aa)    
Predicted Functional Partners:
DDB0229820
Uncharacterized protein; Belongs to the GST superfamily.
   
    0.538
DDB0187091
Uncharacterized protein.
   
    0.538
DDB0205300
Uncharacterized protein.
   
    0.538
DDB0216681
Uncharacterized protein.
   
    0.538
DDB0215299
Uncharacterized protein.
   
    0.527
DDB0190268
Uncharacterized protein.
   
    0.510
DDB_G0284369
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
     
  0.499
uba5
Ubiquitin-like modifier-activating enzyme 5; E1-like enzyme which activates ufm1.
     
  0.499
commd8
COMM domain-containing protein 8.
     
  0.499
commd1
COMM domain-containing protein 1.
     
  0.499
Your Current Organism:
Dictyostelium discoideum
NCBI taxonomy Id: 44689
Other names: D. discoideum
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