Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDB0191602 | DDB_G0279805 | Q54E37 | Q54WA1 | Uncharacterized protein. | Uncharacterized protein. | 0.872 |
DDB0191602 | Prpf3 | Q54E37 | Q8T2A7 | Uncharacterized protein. | Uncharacterized protein. | 0.826 |
DDB0191602 | lsm2 | Q54E37 | Q54TF6 | Uncharacterized protein. | Probable U6 snRNA-associated Sm-like protein LSm2; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.994 |
DDB0191602 | lsm3 | Q54E37 | Q1ZXK3 | Uncharacterized protein. | Probable U6 snRNA-associated Sm-like protein LSm3; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.871 |
DDB0191602 | lsm4 | Q54E37 | Q54KX4 | Uncharacterized protein. | Probable U6 snRNA-associated Sm-like protein LSm4; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.992 |
DDB0191602 | lsm5 | Q54E37 | Q55EX5 | Uncharacterized protein. | Probable U6 snRNA-associated Sm-like protein LSm5; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.993 |
DDB0191602 | lsm6 | Q54E37 | Q552U1 | Uncharacterized protein. | Probable U6 snRNA-associated Sm-like protein LSm6; Component of LSm protein complexes, which are involved in RNA processing and may function in a chaperone-like manner, facilitating the efficient association of RNA processing factors with their substrates. Component of the cytoplasmic LSM1-LSM7 complex, which is thought to be involved in mRNA degradation by activating the decapping step in the 5'-to-3' mRNA decay pathway. Component of the nuclear LSM2- LSM8 complex, which is involved in splicing of nuclear mRNAs. LSM2-LSM8 associates with multiple snRNP complexes containing the U6 snRN [...] | 0.990 |
DDB0191602 | lsm7 | Q54E37 | Q54HF6 | Uncharacterized protein. | Probable U6 snRNA-associated Sm-like protein LSm7; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.992 |
DDB0191602 | lsm8 | Q54E37 | Q1ZXD5 | Uncharacterized protein. | Probable U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.995 |
DDB0191602 | prpf31 | Q54E37 | C7G068 | Uncharacterized protein. | Pre-mRNA processing factor 31. | 0.844 |
DDB_G0279805 | DDB0191602 | Q54WA1 | Q54E37 | Uncharacterized protein. | Uncharacterized protein. | 0.872 |
DDB_G0279805 | Prpf3 | Q54WA1 | Q8T2A7 | Uncharacterized protein. | Uncharacterized protein. | 0.831 |
DDB_G0279805 | lsm2 | Q54WA1 | Q54TF6 | Uncharacterized protein. | Probable U6 snRNA-associated Sm-like protein LSm2; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.943 |
DDB_G0279805 | lsm4 | Q54WA1 | Q54KX4 | Uncharacterized protein. | Probable U6 snRNA-associated Sm-like protein LSm4; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.910 |
DDB_G0279805 | lsm5 | Q54WA1 | Q55EX5 | Uncharacterized protein. | Probable U6 snRNA-associated Sm-like protein LSm5; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.940 |
DDB_G0279805 | lsm6 | Q54WA1 | Q552U1 | Uncharacterized protein. | Probable U6 snRNA-associated Sm-like protein LSm6; Component of LSm protein complexes, which are involved in RNA processing and may function in a chaperone-like manner, facilitating the efficient association of RNA processing factors with their substrates. Component of the cytoplasmic LSM1-LSM7 complex, which is thought to be involved in mRNA degradation by activating the decapping step in the 5'-to-3' mRNA decay pathway. Component of the nuclear LSM2- LSM8 complex, which is involved in splicing of nuclear mRNAs. LSM2-LSM8 associates with multiple snRNP complexes containing the U6 snRN [...] | 0.930 |
DDB_G0279805 | lsm7 | Q54WA1 | Q54HF6 | Uncharacterized protein. | Probable U6 snRNA-associated Sm-like protein LSm7; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.916 |
DDB_G0279805 | lsm8 | Q54WA1 | Q1ZXD5 | Uncharacterized protein. | Probable U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.916 |
DDB_G0279805 | prpf31 | Q54WA1 | C7G068 | Uncharacterized protein. | Pre-mRNA processing factor 31. | 0.829 |
Prpf3 | DDB0191602 | Q8T2A7 | Q54E37 | Uncharacterized protein. | Uncharacterized protein. | 0.826 |
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