STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pks40Probable polyketide synthase 40; Probable polyketide synthase. (2552 aa)    
Predicted Functional Partners:
DDB0203555
PKS_AT domain-containing protein.
 
0.518
DDB0218601
PKS_AT domain-containing protein.
 
0.517
DDB0203528
PKS_AT domain-containing protein.
 
0.505
DDB0187496
PKS_AT domain-containing protein.
  
0.462
DDB0188746
Carrier domain-containing protein.
 
 0.448
DDB0192108
CBM49 domain-containing protein.
  
 
 0.408
DDB0201763
PKS_AT domain-containing protein.
  
 
 0.405
DDB0190777
CBM49 domain-containing protein.
  
 
 0.402
Your Current Organism:
Dictyostelium discoideum
NCBI taxonomy Id: 44689
Other names: D. discoideum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.