Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDB0188445 | DDB0189731 | Q54HF9 | Q55FM7 | VPS9 domain-containing protein. | Rab GDP dissociation inhibitor; Belongs to the Rab GDI family. | 0.473 |
DDB0188445 | DDB0206402 | Q54HF9 | Q54VT9 | VPS9 domain-containing protein. | Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family. | 0.416 |
DDB0188445 | DDB0206416 | Q54HF9 | Q54VS5 | VPS9 domain-containing protein. | VPS9 domain-containing protein. | 0.438 |
DDB0188445 | DDB0218662 | Q54HF9 | Q54NU1 | VPS9 domain-containing protein. | VPS9 domain-containing protein. | 0.400 |
DDB0188445 | DDB0219647 | Q54HF9 | Q54F48 | VPS9 domain-containing protein. | Uncharacterized protein. | 0.400 |
DDB0188445 | eif2b2 | Q54HF9 | Q54EY2 | VPS9 domain-containing protein. | Translation initiation factor eIF-2B subunit beta; Catalyzes the exchange of eukaryotic initiation factor 2- bound GDP for GTP; Belongs to the eIF-2B alpha/beta/delta subunits family. | 0.470 |
DDB0188445 | rab21 | Q54HF9 | P34142 | VPS9 domain-containing protein. | Ras-related protein Rab-21; Involved in the regulation of phagocytosis. | 0.403 |
DDB0188445 | rabJ | Q54HF9 | Q8MYF2 | VPS9 domain-containing protein. | Ras-related protein RabJ. | 0.598 |
DDB0188445 | rabP | Q54HF9 | Q54FG4 | VPS9 domain-containing protein. | Ras-related protein RabP. | 0.438 |
DDB0188445 | vps29 | Q54HF9 | Q54IF7 | VPS9 domain-containing protein. | Vacuolar protein sorting-associated protein 29; Plays a role in vesicular protein sorting. Component of the membrane-associated retromer complex which is essential in endosome-to- Golgi retrograde transport. The vps29-vps26-vps35 subcomplex may be involved in cargo selection. | 0.526 |
DDB0189731 | DDB0188445 | Q55FM7 | Q54HF9 | Rab GDP dissociation inhibitor; Belongs to the Rab GDI family. | VPS9 domain-containing protein. | 0.473 |
DDB0189731 | DDB0206402 | Q55FM7 | Q54VT9 | Rab GDP dissociation inhibitor; Belongs to the Rab GDI family. | Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family. | 0.459 |
DDB0189731 | DDB0206416 | Q55FM7 | Q54VS5 | Rab GDP dissociation inhibitor; Belongs to the Rab GDI family. | VPS9 domain-containing protein. | 0.406 |
DDB0189731 | DDB0218662 | Q55FM7 | Q54NU1 | Rab GDP dissociation inhibitor; Belongs to the Rab GDI family. | VPS9 domain-containing protein. | 0.472 |
DDB0189731 | DDB0219647 | Q55FM7 | Q54F48 | Rab GDP dissociation inhibitor; Belongs to the Rab GDI family. | Uncharacterized protein. | 0.472 |
DDB0189731 | rab21 | Q55FM7 | P34142 | Rab GDP dissociation inhibitor; Belongs to the Rab GDI family. | Ras-related protein Rab-21; Involved in the regulation of phagocytosis. | 0.754 |
DDB0189731 | rabJ | Q55FM7 | Q8MYF2 | Rab GDP dissociation inhibitor; Belongs to the Rab GDI family. | Ras-related protein RabJ. | 0.799 |
DDB0189731 | rabP | Q55FM7 | Q54FG4 | Rab GDP dissociation inhibitor; Belongs to the Rab GDI family. | Ras-related protein RabP. | 0.692 |
DDB0206402 | DDB0188445 | Q54VT9 | Q54HF9 | Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family. | VPS9 domain-containing protein. | 0.416 |
DDB0206402 | DDB0189731 | Q54VT9 | Q55FM7 | Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family. | Rab GDP dissociation inhibitor; Belongs to the Rab GDI family. | 0.459 |
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