STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDB0188951Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (501 aa)    
Predicted Functional Partners:
DDB_G0275885
RRM domain-containing protein.
   
 
 0.963
gnl3
Guanine nucleotide-binding protein-like 3 homolog; Belongs to the TRAFAC class YlqF/YawG GTPase family.
   
 
 0.960
DDB0185982
Uncharacterized protein.
   
 
 0.959
fsjC
pre-rRNA 2'-O-ribose RNA methyltransferase; RNA 2'-O-methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
  
 
 0.957
mrt4
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.957
DDB0186212
Uncharacterized protein.
   
 
 0.956
bxdc1
Ribosome production factor 2 homolog.
   
 
 0.952
nip7
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly.
  
 
 0.942
rlp24
Probable ribosome biogenesis protein RLP24; Involved in the biogenesis of the 60S ribosomal subunit. Ensures the docking of nog1 to pre-60S particles. Activates and recruits ATPase AFG2 to cytoplasmic pre-60S ribosomal particles.
   
 
 0.939
DDB0192052
Uncharacterized protein.
   
 
 0.937
Your Current Organism:
Dictyostelium discoideum
NCBI taxonomy Id: 44689
Other names: D. discoideum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.