Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cdc40 | ascc3 | Q54HF5 | Q54G57 | WD_REPEATS_REGION domain-containing protein. | Activating signal cointegrator 1 complex subunit 3. | 0.875 |
Cdc40 | prpf8 | Q54HF5 | Q8T295 | WD_REPEATS_REGION domain-containing protein. | Pre-mRNA-processing-splicing factor 8 homolog; Functions as a scaffold that mediates the ordered assembly of spliceosomal proteins and snRNAs. Required for the assembly of the U4/U6-U5 tri-snRNP complex. Functions as scaffold that positions spliceosomal U2, U5 and U6 snRNAs at splice sites on pre-mRNA substrates, so that splicing can occur. Interacts with both the 5' and the 3' splice site. | 0.991 |
Cdc40 | sf3b2 | Q54HF5 | Q1ZXF6 | WD_REPEATS_REGION domain-containing protein. | PSP proline-rich domain-containing protein. | 0.852 |
Cdc40 | snwA | Q54HF5 | P54705 | WD_REPEATS_REGION domain-containing protein. | Protein snwA. | 0.993 |
Cdc40 | xab2 | Q54HF5 | Q54Z08 | WD_REPEATS_REGION domain-containing protein. | Pre-mRNA-splicing factor SYF1; Involved in pre-mRNA splicing as component of the spliceosome. Involved in transcription-coupled repair (TCR), transcription and pre-mRNA splicing. | 0.995 |
DDB0190646 | ascc2 | Q55CV3 | Q54VC4 | zf-C2HC5 domain-containing protein. | Activating signal cointegrator 1 complex subunit 2 homolog; Enhances NF-kappa-B, SRF and AP1 transactivation. Belongs to the ASCC2 family. | 0.945 |
DDB0190646 | ascc3 | Q55CV3 | Q54G57 | zf-C2HC5 domain-containing protein. | Activating signal cointegrator 1 complex subunit 3. | 0.911 |
DDB0216406 | Prpf3 | Q54TQ2 | Q8T2A7 | SART-1 family protein. | Uncharacterized protein. | 0.996 |
DDB0216406 | ascc3 | Q54TQ2 | Q54G57 | SART-1 family protein. | Activating signal cointegrator 1 complex subunit 3. | 0.878 |
DDB0216406 | prpf31 | Q54TQ2 | C7G068 | SART-1 family protein. | Pre-mRNA processing factor 31. | 0.997 |
DDB0216406 | prpf8 | Q54TQ2 | Q8T295 | SART-1 family protein. | Pre-mRNA-processing-splicing factor 8 homolog; Functions as a scaffold that mediates the ordered assembly of spliceosomal proteins and snRNAs. Required for the assembly of the U4/U6-U5 tri-snRNP complex. Functions as scaffold that positions spliceosomal U2, U5 and U6 snRNAs at splice sites on pre-mRNA substrates, so that splicing can occur. Interacts with both the 5' and the 3' splice site. | 0.993 |
DDB0216406 | sf3b2 | Q54TQ2 | Q1ZXF6 | SART-1 family protein. | PSP proline-rich domain-containing protein. | 0.992 |
DDB0216406 | snwA | Q54TQ2 | P54705 | SART-1 family protein. | Protein snwA. | 0.701 |
DDB0216406 | xab2 | Q54TQ2 | Q54Z08 | SART-1 family protein. | Pre-mRNA-splicing factor SYF1; Involved in pre-mRNA splicing as component of the spliceosome. Involved in transcription-coupled repair (TCR), transcription and pre-mRNA splicing. | 0.778 |
Prpf3 | DDB0216406 | Q8T2A7 | Q54TQ2 | Uncharacterized protein. | SART-1 family protein. | 0.996 |
Prpf3 | ascc3 | Q8T2A7 | Q54G57 | Uncharacterized protein. | Activating signal cointegrator 1 complex subunit 3. | 0.871 |
Prpf3 | prpf31 | Q8T2A7 | C7G068 | Uncharacterized protein. | Pre-mRNA processing factor 31. | 0.997 |
Prpf3 | prpf8 | Q8T2A7 | Q8T295 | Uncharacterized protein. | Pre-mRNA-processing-splicing factor 8 homolog; Functions as a scaffold that mediates the ordered assembly of spliceosomal proteins and snRNAs. Required for the assembly of the U4/U6-U5 tri-snRNP complex. Functions as scaffold that positions spliceosomal U2, U5 and U6 snRNAs at splice sites on pre-mRNA substrates, so that splicing can occur. Interacts with both the 5' and the 3' splice site. | 0.995 |
Prpf3 | sf3b2 | Q8T2A7 | Q1ZXF6 | Uncharacterized protein. | PSP proline-rich domain-containing protein. | 0.990 |
Prpf3 | snwA | Q8T2A7 | P54705 | Uncharacterized protein. | Protein snwA. | 0.519 |
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