STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrpARNA-directed RNA polymerase. (2417 aa)    
Predicted Functional Partners:
drnB
Uncharacterized protein.
   
 
 0.900
DrnA
Putative RNase III.
      
 0.816
agnE
Argonaut-like protein.
   
  
 0.780
agnB
Argonaut-like protein.
   
  
 0.705
dnmA
DNA (cytosine-5)-methyltransferase; Involved in epigenetic gene silencing. Methylates specific cytosine residues in the retrotransposons DIRS-1 and Skipper.
      
 0.701
DDB0206175
SAM domain-containing protein.
   
 0.688
DDB0167693
SAM domain-containing protein.
   
 0.688
helF
Uncharacterized protein.
   
 
0.684
agnD
Argonaut-like protein; Belongs to the argonaute family.
   
  
 0.649
rrpC
RNA-directed RNA polymerase.
     
0.641
Your Current Organism:
Dictyostelium discoideum
NCBI taxonomy Id: 44689
Other names: D. discoideum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.