Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ArpD | DDB0188089 | Q54UQ7 | Q54IH7 | Uncharacterized protein; Belongs to the actin family. | SANT domain-containing protein. | 0.988 |
ArpD | DDB0219387 | Q54UQ7 | Q54IB7 | Uncharacterized protein; Belongs to the actin family. | Uncharacterized protein. | 0.525 |
ArpD | H4a | Q54UQ7 | Q76NW2 | Uncharacterized protein; Belongs to the actin family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.927 |
ArpD | Isw | Q54UQ7 | Q54CI4 | Uncharacterized protein; Belongs to the actin family. | Uncharacterized protein. | 0.414 |
ArpD | Rvb1 | Q54UQ7 | Q54C28 | Uncharacterized protein; Belongs to the actin family. | RuvB-like helicase; Belongs to the RuvB family. | 0.978 |
ArpD | rvb2 | Q54UQ7 | Q54UW5 | Uncharacterized protein; Belongs to the actin family. | RuvB-like helicase 2; Has double-stranded DNA-stimulated ATPase and ATP-dependent DNA helicase (5' to 3') activity suggesting a role in nuclear processes such as recombination and transcription. | 0.982 |
DDB0188089 | ArpD | Q54IH7 | Q54UQ7 | SANT domain-containing protein. | Uncharacterized protein; Belongs to the actin family. | 0.988 |
DDB0188089 | DDB0219387 | Q54IH7 | Q54IB7 | SANT domain-containing protein. | Uncharacterized protein. | 0.537 |
DDB0188089 | H4a | Q54IH7 | Q76NW2 | SANT domain-containing protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.756 |
DDB0188089 | Rvb1 | Q54IH7 | Q54C28 | SANT domain-containing protein. | RuvB-like helicase; Belongs to the RuvB family. | 0.986 |
DDB0188089 | rvb2 | Q54IH7 | Q54UW5 | SANT domain-containing protein. | RuvB-like helicase 2; Has double-stranded DNA-stimulated ATPase and ATP-dependent DNA helicase (5' to 3') activity suggesting a role in nuclear processes such as recombination and transcription. | 0.974 |
DDB0217507 | DDB0219387 | Q8T145 | Q54IB7 | Uncharacterized protein. | Uncharacterized protein. | 0.813 |
DDB0217507 | Isw | Q8T145 | Q54CI4 | Uncharacterized protein. | Uncharacterized protein. | 0.571 |
DDB0217507 | pcna | Q8T145 | Q54K47 | Uncharacterized protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand. | 0.994 |
DDB0217507 | ube2v | Q8T145 | Q54D06 | Uncharacterized protein. | Probable ubiquitin-conjugating enzyme E2 variant; Has no ubiquitin ligase activity on its own. The ube2v/ube2n heterodimer catalyzes the synthesis of non-canonical poly-ubiquitin chains that are linked through 'Lys-63'. This type of poly- ubiquitination does not lead to protein degradation by the proteasome. Mediates transcriptional activation of target genes. Plays a role in the control of progress through the cell cycle and differentiation. Plays a role in the error-free DNA repair pathway and contributes to the survival of cells after DNA damage (By similarity); Belongs to the ubiqu [...] | 0.891 |
DDB0217507 | wrn | Q8T145 | B0G0Y4 | Uncharacterized protein. | ATP-dependent DNA helicase RecQ family protein. | 0.998 |
DDB0219387 | ArpD | Q54IB7 | Q54UQ7 | Uncharacterized protein. | Uncharacterized protein; Belongs to the actin family. | 0.525 |
DDB0219387 | DDB0188089 | Q54IB7 | Q54IH7 | Uncharacterized protein. | SANT domain-containing protein. | 0.537 |
DDB0219387 | DDB0217507 | Q54IB7 | Q8T145 | Uncharacterized protein. | Uncharacterized protein. | 0.813 |
DDB0219387 | H4a | Q54IB7 | Q76NW2 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.445 |
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