Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDB0169464 | DDB0187042 | Q75JL8 | Q54LJ4 | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | Poly [ADP-ribose] polymerase; Belongs to the 14-3-3 family. | 0.538 |
DDB0169464 | DDB0190151 | Q75JL8 | Q55ED3 | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | Uncharacterized protein. | 0.543 |
DDB0187042 | DDB0169464 | Q54LJ4 | Q75JL8 | Poly [ADP-ribose] polymerase; Belongs to the 14-3-3 family. | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | 0.538 |
DDB0187042 | DDB0190151 | Q54LJ4 | Q55ED3 | Poly [ADP-ribose] polymerase; Belongs to the 14-3-3 family. | Uncharacterized protein. | 0.506 |
DDB0187042 | H4a | Q54LJ4 | Q76NW2 | Poly [ADP-ribose] polymerase; Belongs to the 14-3-3 family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.467 |
DDB0187042 | ParG | Q54LJ4 | Q54Z28 | Poly [ADP-ribose] polymerase; Belongs to the 14-3-3 family. | Uncharacterized protein. | 0.432 |
DDB0187042 | ku80 | Q54LJ4 | Q54LY5 | Poly [ADP-ribose] polymerase; Belongs to the 14-3-3 family. | X-ray repair cross-complementing protein 5; Involved in non-homologous end joining (NHEJ) DNA double strand break repair. | 0.413 |
DDB0190151 | DDB0169464 | Q55ED3 | Q75JL8 | Uncharacterized protein. | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | 0.543 |
DDB0190151 | DDB0187042 | Q55ED3 | Q54LJ4 | Uncharacterized protein. | Poly [ADP-ribose] polymerase; Belongs to the 14-3-3 family. | 0.506 |
H4a | DDB0187042 | Q76NW2 | Q54LJ4 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Poly [ADP-ribose] polymerase; Belongs to the 14-3-3 family. | 0.467 |
H4a | ku80 | Q76NW2 | Q54LY5 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | X-ray repair cross-complementing protein 5; Involved in non-homologous end joining (NHEJ) DNA double strand break repair. | 0.484 |
ParG | DDB0187042 | Q54Z28 | Q54LJ4 | Uncharacterized protein. | Poly [ADP-ribose] polymerase; Belongs to the 14-3-3 family. | 0.432 |
ParG | ku80 | Q54Z28 | Q54LY5 | Uncharacterized protein. | X-ray repair cross-complementing protein 5; Involved in non-homologous end joining (NHEJ) DNA double strand break repair. | 0.466 |
ku80 | DDB0187042 | Q54LY5 | Q54LJ4 | X-ray repair cross-complementing protein 5; Involved in non-homologous end joining (NHEJ) DNA double strand break repair. | Poly [ADP-ribose] polymerase; Belongs to the 14-3-3 family. | 0.413 |
ku80 | H4a | Q54LY5 | Q76NW2 | X-ray repair cross-complementing protein 5; Involved in non-homologous end joining (NHEJ) DNA double strand break repair. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.484 |
ku80 | ParG | Q54LY5 | Q54Z28 | X-ray repair cross-complementing protein 5; Involved in non-homologous end joining (NHEJ) DNA double strand break repair. | Uncharacterized protein. | 0.466 |