STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDB0186491RNB domain-containing protein. (1642 aa)    
Predicted Functional Partners:
exosc10
3'-5' exonuclease.
   
 0.901
DDB_G0284053
Uncharacterized protein.
   
 0.888
DDB_G0285377
Uncharacterized protein.
   
 0.851
DDB0202891
Uncharacterized protein.
   
 0.851
DDB0183823
RNase_PH domain-containing protein.
   
 0.850
exosc7
Putative exosome complex exonuclease RRP42; Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events.
   
 0.850
DDB0216807
RNase_PH domain-containing protein.
   
 0.850
DDB0184528
Uncharacterized protein.
   
 0.849
exosc3
Putative exosome complex component rrp40; Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events.
   
 0.840
DDB0183814
Uncharacterized protein.
   
 0.835
Your Current Organism:
Dictyostelium discoideum
NCBI taxonomy Id: 44689
Other names: D. discoideum
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