Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDB_G0283417 | nmd3 | Q54R42 | Q55BF2 | Probable dual specificity protein phosphatase DDB_G0283417; Has a dual specificity toward Ser/Thr and Tyr-containing proteins; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. | 60S ribosomal export protein NMD3; Acts as an adapter for the xpo1-mediated export of the 60S ribosomal subunit. | 0.428 |
DDB_G0283417 | prlA | Q54R42 | Q1ZXG4 | Probable dual specificity protein phosphatase DDB_G0283417; Has a dual specificity toward Ser/Thr and Tyr-containing proteins; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. | Proliferation-associated protein A; Belongs to the peptidase M24 family. | 0.404 |
nmd3 | DDB_G0283417 | Q55BF2 | Q54R42 | 60S ribosomal export protein NMD3; Acts as an adapter for the xpo1-mediated export of the 60S ribosomal subunit. | Probable dual specificity protein phosphatase DDB_G0283417; Has a dual specificity toward Ser/Thr and Tyr-containing proteins; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. | 0.428 |
nmd3 | prlA | Q55BF2 | Q1ZXG4 | 60S ribosomal export protein NMD3; Acts as an adapter for the xpo1-mediated export of the 60S ribosomal subunit. | Proliferation-associated protein A; Belongs to the peptidase M24 family. | 0.996 |
prlA | DDB_G0283417 | Q1ZXG4 | Q54R42 | Proliferation-associated protein A; Belongs to the peptidase M24 family. | Probable dual specificity protein phosphatase DDB_G0283417; Has a dual specificity toward Ser/Thr and Tyr-containing proteins; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. | 0.404 |
prlA | nmd3 | Q1ZXG4 | Q55BF2 | Proliferation-associated protein A; Belongs to the peptidase M24 family. | 60S ribosomal export protein NMD3; Acts as an adapter for the xpo1-mediated export of the 60S ribosomal subunit. | 0.996 |