DDB0220596 protein (Dictyostelium discoideum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DDB0220596

Uncharacterized protein. (139 aa)

Predicted Functional Partners:

cox17

0.711

DDB0186421

0.611

DDB0185899

0.606

dclre1

0.551

PufA

0.530

DDB0188431

0.522

DDB0187989

0.504

DDB_G0294575

0.483

DDB0203462

0.483

DDB0191031

0.478

Your Current Organism:

Dictyostelium discoideum

NCBI taxonomy Id: 44689
Other names: D. discoideum

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDB0185899	DDB0186421	Q54PZ4	Q54NG7	Uncharacterized protein.	Uncharacterized protein.	0.902
DDB0185899	DDB0188431	Q54PZ4	Q54HH3	Uncharacterized protein.	Endo/exonuclease/phosphatase domain-containing protein.	0.951
DDB0185899	DDB0220596	Q54PZ4	Q54WA6	Uncharacterized protein.	Uncharacterized protein.	0.606
DDB0185899	PufA	Q54PZ4	Q54WA7	Uncharacterized protein.	RNA binding protein.	0.606
DDB0186421	DDB0185899	Q54NG7	Q54PZ4	Uncharacterized protein.	Uncharacterized protein.	0.902
DDB0186421	DDB0188431	Q54NG7	Q54HH3	Uncharacterized protein.	Endo/exonuclease/phosphatase domain-containing protein.	0.951
DDB0186421	DDB0220596	Q54NG7	Q54WA6	Uncharacterized protein.	Uncharacterized protein.	0.611
DDB0186421	PufA	Q54NG7	Q54WA7	Uncharacterized protein.	RNA binding protein.	0.616
DDB0187989	DDB0220596	Q54IS5	Q54WA6	PUM-HD domain-containing protein.	Uncharacterized protein.	0.504
DDB0187989	PufA	Q54IS5	Q54WA7	PUM-HD domain-containing protein.	RNA binding protein.	0.505
DDB0188431	DDB0185899	Q54HH3	Q54PZ4	Endo/exonuclease/phosphatase domain-containing protein.	Uncharacterized protein.	0.951
DDB0188431	DDB0186421	Q54HH3	Q54NG7	Endo/exonuclease/phosphatase domain-containing protein.	Uncharacterized protein.	0.951
DDB0188431	DDB0220596	Q54HH3	Q54WA6	Endo/exonuclease/phosphatase domain-containing protein.	Uncharacterized protein.	0.522
DDB0188431	PufA	Q54HH3	Q54WA7	Endo/exonuclease/phosphatase domain-containing protein.	RNA binding protein.	0.522
DDB0191031	DDB0220596	Q55BQ9	Q54WA6	AD domain-containing protein.	Uncharacterized protein.	0.478
DDB0191031	PufA	Q55BQ9	Q54WA7	AD domain-containing protein.	RNA binding protein.	0.478
DDB0203462	DDB0220596	Q551V3	Q54WA6	Uncharacterized protein.	Uncharacterized protein.	0.483
DDB0203462	DDB_G0294575	Q551V3	Q1ZXJ5	Uncharacterized protein.	Ankyrin repeat-containing protein.	0.897
DDB0203462	PufA	Q551V3	Q54WA7	Uncharacterized protein.	RNA binding protein.	0.485
DDB0220596	DDB0185899	Q54WA6	Q54PZ4	Uncharacterized protein.	Uncharacterized protein.	0.606