Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDB0186073 | DDB0188327 | Q54PG9 | Q54HT2 | MI domain-containing protein. | Uncharacterized protein. | 0.748 |
DDB0186073 | DDB0219852 | Q54PG9 | Q54BV0 | MI domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.953 |
DDB0186073 | DDB_G0278751 | Q54PG9 | Q54XT8 | MI domain-containing protein. | Ribosomal RNA processing protein 36 homolog; Involved in the early processing steps of the pre-rRNA in the maturation pathway leading to the 18S rRNA; Belongs to the RRP36 family. | 0.958 |
DDB0186073 | Utp18 | Q54PG9 | Q55BA1 | MI domain-containing protein. | Uncharacterized protein. | 0.945 |
DDB0186073 | bysl | Q54PG9 | Q54IS0 | MI domain-containing protein. | Bystin; Required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits; Belongs to the bystin family. | 0.680 |
DDB0186073 | ddx10 | Q54PG9 | Q54Q94 | MI domain-containing protein. | Probable ATP-dependent RNA helicase ddx10; Probable ATP-dependent RNA helicase which may be involved in ribosome biogenesis; Belongs to the DEAD box helicase family. DDX10/DBP4 subfamily. | 0.972 |
DDB0186073 | esf2 | Q54PG9 | Q54BL2 | MI domain-containing protein. | Putative pre-rRNA-processing protein esf2; May be involved in the small subunit (SSU) processome assembly and function, and in the 17S rRNA synthesis. | 0.937 |
DDB0186073 | krr1 | Q54PG9 | Q54UU6 | MI domain-containing protein. | KRR1 small subunit processome component homolog; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (By similarity). | 0.973 |
DDB0186073 | utp6 | Q54PG9 | Q54WN5 | MI domain-containing protein. | U3 small nucleolar RNA-associated protein 6 homolog; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the UTP6 family. | 0.953 |
DDB0188327 | DDB0186073 | Q54HT2 | Q54PG9 | Uncharacterized protein. | MI domain-containing protein. | 0.748 |
DDB0188327 | DDB0190597 | Q54HT2 | Q55D06 | Uncharacterized protein. | RRP7 domain-containing protein. | 0.715 |
DDB0188327 | DDB0219852 | Q54HT2 | Q54BV0 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.918 |
DDB0188327 | DDB_G0278751 | Q54HT2 | Q54XT8 | Uncharacterized protein. | Ribosomal RNA processing protein 36 homolog; Involved in the early processing steps of the pre-rRNA in the maturation pathway leading to the 18S rRNA; Belongs to the RRP36 family. | 0.986 |
DDB0188327 | Utp18 | Q54HT2 | Q55BA1 | Uncharacterized protein. | Uncharacterized protein. | 0.887 |
DDB0188327 | bysl | Q54HT2 | Q54IS0 | Uncharacterized protein. | Bystin; Required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits; Belongs to the bystin family. | 0.814 |
DDB0188327 | ddx10 | Q54HT2 | Q54Q94 | Uncharacterized protein. | Probable ATP-dependent RNA helicase ddx10; Probable ATP-dependent RNA helicase which may be involved in ribosome biogenesis; Belongs to the DEAD box helicase family. DDX10/DBP4 subfamily. | 0.521 |
DDB0188327 | esf2 | Q54HT2 | Q54BL2 | Uncharacterized protein. | Putative pre-rRNA-processing protein esf2; May be involved in the small subunit (SSU) processome assembly and function, and in the 17S rRNA synthesis. | 0.970 |
DDB0188327 | krr1 | Q54HT2 | Q54UU6 | Uncharacterized protein. | KRR1 small subunit processome component homolog; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (By similarity). | 0.892 |
DDB0188327 | utp6 | Q54HT2 | Q54WN5 | Uncharacterized protein. | U3 small nucleolar RNA-associated protein 6 homolog; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the UTP6 family. | 0.903 |
DDB0190597 | DDB0188327 | Q55D06 | Q54HT2 | RRP7 domain-containing protein. | Uncharacterized protein. | 0.715 |
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