STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rimAUncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (365 aa)    
Predicted Functional Partners:
DDB_G0281127
Putative beta-eliminating lyase-like protein.
  
 
 0.493
allB1
Probable allantoinase 1.
  
 
 0.481
DDB0204034
Beta_elim_lyase domain-containing protein.
  
 
 0.481
allB2
Probable allantoinase 2.
  
 
 0.481
pyd2
Dihydropyrimidinase; Catalyzes the second step of the reductive pyrimidine degradation, the reversible hydrolytic ring opening of dihydropyrimidines. Can catalyze the ring opening of 5,6-dihydrouracil to N-carbamyl-alanine and of 5,6-dihydrothymine to N-carbamyl-amino isobutyrate.
  
 
 0.481
DDB0187098
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
  
 
 0.472
rpl36a
60S ribosomal protein L36a; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 
 0.430
uox
Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin; Belongs to the uricase family.
  
  
 0.427
masB
Malate synthase.
  
  
 0.417
DDB0230179
Isocitrate lyase.
  
  
 0.417
Your Current Organism:
Dictyostelium discoideum
NCBI taxonomy Id: 44689
Other names: D. discoideum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.