Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Nup93 | atp5f1b | Q55GW5 | Q55CS9 | Nuclear pore protein. | ATP synthase subunit beta, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the c [...] | 0.705 |
| Nup93 | ddx20 | Q55GW5 | Q54ZI9 | Nuclear pore protein. | Probable ATP-dependent RNA helicase ddx20; Probable ATP-binding RNA helicase which may be involved in pre-mRNA splicing; Belongs to the DEAD box helicase family. DDX20 subfamily. | 0.787 |
| Nup93 | phbB | Q55GW5 | Q54Q31 | Nuclear pore protein. | Prohibitin-2; Prohibitin probably acts as a holdase/unfoldase for the stabilization of newly synthesized mitochondrial proteins. | 0.712 |
| Nup93 | timm50 | Q55GW5 | Q55C70 | Nuclear pore protein. | Mitochondrial import inner membrane translocase subunit tim50; Component of the mitochondrial import inner membrane translocase that mediates the translocation of transit peptide- containing proteins across the mitochondrial inner membrane. | 0.783 |
| SnrpD1 | ddx20 | Q54YX5 | Q54ZI9 | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | Probable ATP-dependent RNA helicase ddx20; Probable ATP-binding RNA helicase which may be involved in pre-mRNA splicing; Belongs to the DEAD box helicase family. DDX20 subfamily. | 0.699 |
| SnrpD1 | gemin1 | Q54YX5 | Q86AD2 | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | Component of gems protein 1; May play an essential role in spliceosomal snRNP assembly in the cytoplasm and may be required for pre-mRNA splicing in the nucleus. Belongs to the SMN family. | 0.866 |
| SnrpD1 | gemin2 | Q54YX5 | Q54KN2 | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | Gem-associated protein 2; May play an essential role in spliceosomal snRNP assembly in the cytoplasm and may be required for pre-mRNA splicing in the nucleus. Belongs to the gemin-2 family. | 0.684 |
| SnrpD1 | gemin5 | Q54YX5 | Q54IY5 | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | Component of gems protein 5; Required for the assembly of the SMN complex that plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Gemin5 acts as the snRNA-binding protein of the SMN complex. Binds to the 7- methylguanosine cap of RNA molecules; Belongs to the WD repeat gemin-5 family. | 0.614 |
| atp5f1b | Nup93 | Q55CS9 | Q55GW5 | ATP synthase subunit beta, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the c [...] | Nuclear pore protein. | 0.705 |
| atp5f1b | ddx20 | Q55CS9 | Q54ZI9 | ATP synthase subunit beta, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the c [...] | Probable ATP-dependent RNA helicase ddx20; Probable ATP-binding RNA helicase which may be involved in pre-mRNA splicing; Belongs to the DEAD box helicase family. DDX20 subfamily. | 0.863 |
| atp5f1b | mef2A | Q55CS9 | Q55F37 | ATP synthase subunit beta, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the c [...] | Transcription factor mef2A; Transcription factor that regulates cell differentiation during development. Seems to negatively regulate prestalk gene expression and positively regulate prespore gene expression. | 0.483 |
| atp5f1b | phbB | Q55CS9 | Q54Q31 | ATP synthase subunit beta, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the c [...] | Prohibitin-2; Prohibitin probably acts as a holdase/unfoldase for the stabilization of newly synthesized mitochondrial proteins. | 0.924 |
| atp5f1b | timm50 | Q55CS9 | Q55C70 | ATP synthase subunit beta, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the c [...] | Mitochondrial import inner membrane translocase subunit tim50; Component of the mitochondrial import inner membrane translocase that mediates the translocation of transit peptide- containing proteins across the mitochondrial inner membrane. | 0.863 |
| ddx20 | Nup93 | Q54ZI9 | Q55GW5 | Probable ATP-dependent RNA helicase ddx20; Probable ATP-binding RNA helicase which may be involved in pre-mRNA splicing; Belongs to the DEAD box helicase family. DDX20 subfamily. | Nuclear pore protein. | 0.787 |
| ddx20 | SnrpD1 | Q54ZI9 | Q54YX5 | Probable ATP-dependent RNA helicase ddx20; Probable ATP-binding RNA helicase which may be involved in pre-mRNA splicing; Belongs to the DEAD box helicase family. DDX20 subfamily. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.699 |
| ddx20 | atp5f1b | Q54ZI9 | Q55CS9 | Probable ATP-dependent RNA helicase ddx20; Probable ATP-binding RNA helicase which may be involved in pre-mRNA splicing; Belongs to the DEAD box helicase family. DDX20 subfamily. | ATP synthase subunit beta, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the c [...] | 0.863 |
| ddx20 | gemin1 | Q54ZI9 | Q86AD2 | Probable ATP-dependent RNA helicase ddx20; Probable ATP-binding RNA helicase which may be involved in pre-mRNA splicing; Belongs to the DEAD box helicase family. DDX20 subfamily. | Component of gems protein 1; May play an essential role in spliceosomal snRNP assembly in the cytoplasm and may be required for pre-mRNA splicing in the nucleus. Belongs to the SMN family. | 0.887 |
| ddx20 | gemin2 | Q54ZI9 | Q54KN2 | Probable ATP-dependent RNA helicase ddx20; Probable ATP-binding RNA helicase which may be involved in pre-mRNA splicing; Belongs to the DEAD box helicase family. DDX20 subfamily. | Gem-associated protein 2; May play an essential role in spliceosomal snRNP assembly in the cytoplasm and may be required for pre-mRNA splicing in the nucleus. Belongs to the gemin-2 family. | 0.927 |
| ddx20 | gemin5 | Q54ZI9 | Q54IY5 | Probable ATP-dependent RNA helicase ddx20; Probable ATP-binding RNA helicase which may be involved in pre-mRNA splicing; Belongs to the DEAD box helicase family. DDX20 subfamily. | Component of gems protein 5; Required for the assembly of the SMN complex that plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Gemin5 acts as the snRNA-binding protein of the SMN complex. Binds to the 7- methylguanosine cap of RNA molecules; Belongs to the WD repeat gemin-5 family. | 0.925 |
| ddx20 | mef2A | Q54ZI9 | Q55F37 | Probable ATP-dependent RNA helicase ddx20; Probable ATP-binding RNA helicase which may be involved in pre-mRNA splicing; Belongs to the DEAD box helicase family. DDX20 subfamily. | Transcription factor mef2A; Transcription factor that regulates cell differentiation during development. Seems to negatively regulate prestalk gene expression and positively regulate prespore gene expression. | 0.700 |
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