STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDB0190776CBM49 domain-containing protein. (1137 aa)    
Predicted Functional Partners:
DDB0218601
PKS_AT domain-containing protein.
  
 
 0.628
DDB0203528
PKS_AT domain-containing protein.
  
 
 0.628
DDB0203555
PKS_AT domain-containing protein.
  
 
 0.628
ndufab1
Acyl carrier protein, mitochondrial; Carrier of the growing fatty acid chain in fatty acid biosynthesis. May be involved in the synthesis of very-long-chain fatty acids. Accessory and non-catalytic subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), which functions in the transfer of electrons from NADH to the respiratory chain (By similarity).
  
  
 0.448
pks45
Probable polyketide synthase 45; Probable polyketide synthase.
  
 
 0.413
pks16
Probable polyketide synthase 16; Probable polyketide synthase.
  
 
 0.407
pks15
Probable polyketide synthase 15; Probable polyketide synthase.
  
 
 0.405
pks28
Probable polyketide synthase 28; Probable polyketide synthase.
  
 
 0.402
DDB0186605
PKS_AT domain-containing protein.
  
 
 0.402
pks42
Probable polyketide synthase 42; Probable polyketide synthase.
  
 
 0.400
Your Current Organism:
Dictyostelium discoideum
NCBI taxonomy Id: 44689
Other names: D. discoideum
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