STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDB0190095Ubiquitinyl hydrolase 1. (2125 aa)    
Predicted Functional Partners:
TAF9
Transcription initiation factor TFIID subunit.
   
 0.918
tra1
Probable transcription-associated protein 1; Belongs to the PI3/PI4-kinase family. TRA1 subfamily.
    
 0.916
DDB0204231
Uncharacterized protein.
    
 0.912
DDB0216344
Myb domain-containing protein.
   
 0.907
eny2
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
    
 
 0.897
DDB_G0272054
DUF1325 family protein.
   
 
 0.881
TAF6
TATA-binding protein-associated-factor.
    
 
 0.860
TAF12
Transcription initiation factor TFIID subunit 12; Part of the multimeric TFIID complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF12 family.
   
 
 0.858
DDB0191760
Uncharacterized protein.
   
 
 0.821
DDB_G0287407
TPR repeat-containing protein DDB_G0287407.
   
 
 0.818
Your Current Organism:
Dictyostelium discoideum
NCBI taxonomy Id: 44689
Other names: D. discoideum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.