STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psiSProtein psiS. (267 aa)    
Predicted Functional Partners:
pcf11
ENTH domain-containing protein.
      
 0.709
rvb2
RuvB-like helicase 2; Has double-stranded DNA-stimulated ATPase and ATP-dependent DNA helicase (5' to 3') activity suggesting a role in nuclear processes such as recombination and transcription.
      
 0.702
Rvb1
RuvB-like helicase; Belongs to the RuvB family.
      
 0.599
nop10
H/ACA ribonucleoprotein complex subunit 3; Required for ribosome biogenesis. Part of the H/ACA small nucleolar ribonucleoprotein (H/ACA snoRNP) complex, which catalyzes pseudouridylation of rRNA (By similarity).
      
 0.450
nop56
Nucleolar protein 56; Required for 60S ribosomal subunit biogenesis; Belongs to the NOP5/NOP56 family.
      
 0.450
nop58
Nucleolar protein 58; Required for 60S ribosomal subunit biogenesis; Belongs to the NOP5/NOP56 family.
      
 0.450
Xrn1
Uncharacterized protein.
      
 0.450
Your Current Organism:
Dictyostelium discoideum
NCBI taxonomy Id: 44689
Other names: D. discoideum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.