STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DG1040CCR4-Not complex component, Not1. (2526 aa)    
Predicted Functional Partners:
cnot11
CCR4-NOT transcription complex subunit 11; Component of the CCR4-NOT complex which is one of the major cellular mRNA deadenylases and is linked to various cellular processes including bulk mRNA degradation, miRNA-mediated repression, translational repression during translational initiation and general transcription regulation. Additional complex functions may be a consequence of its influence on mRNA expression (By similarity). Belongs to the CNOT11 family.
   
 0.999
DDB0186079
NOT2_3_5 domain-containing protein.
   
 0.999
DDB0204159
Uncharacterized protein.
   
 0.999
DDB0219997
NOT2/NOT3/NOT5 family protein.
   
 0.999
DDB0188431
Endo/exonuclease/phosphatase domain-containing protein.
   
 0.997
DDB0216421
Cell differentiation family, Rcd1-like protein.
    
 0.978
DDB0217593
Uncharacterized protein.
    
 0.976
DDB0186421
Uncharacterized protein.
   
 0.953
DDB0185899
Uncharacterized protein.
   
 0.952
DDB0220000
Cell differentiation family, Rcd1-like protein.
    
 0.951
Your Current Organism:
Dictyostelium discoideum
NCBI taxonomy Id: 44689
Other names: D. discoideum
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