STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
orfR1062Uncharacterized protein. (773 aa)    
Predicted Functional Partners:
DDB0216681
Uncharacterized protein.
   
    0.527
St15
Cellulose-binding domain-containing protein.
   
    0.459
CtrB
AA_permease_C domain-containing protein.
   
    0.424
DDB0205558
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
   
 
 0.415
DDB0190812
Uncharacterized protein.
   
    0.412
DDB_G0294577
Rab GTPase.
    
  0.410
DDB0217816
Uncharacterized protein; Belongs to the CDC50/LEM3 family.
   
 
  0.410
nramp1
Metal transporter nramp1 homolog; Depletes iron from the phagolysosome in an ATP-dependent process. May rather act as a symporter of protons and metal cations in an ATP-dependent process. Nramp1 overexpression protected cells from L.pneumophila infection.
   
 
  0.410
comG
Aldehyde dehydrogenase family 3 comG.
   
 
  0.409
dst2
Serine/threonine-protein kinase dst2.
   
 
  0.406
Your Current Organism:
Dictyostelium discoideum
NCBI taxonomy Id: 44689
Other names: D. discoideum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.