Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDB0167929 | DDB_G0290491 | Q86A70 | Q54G11 | CUE domain-containing protein. | Autophagy-related protein 8-like protein DDB_G0290491. | 0.459 |
DDB0167929 | atg8 | Q86A70 | Q86CR8 | CUE domain-containing protein. | Autophagy-related protein 8; Ubiquitin-like modifier involved in autophagosomes formation. Participates in membrane fusion events that take place in the secretory pathway (By similarity); Belongs to the ATG8 family. | 0.462 |
DDB0167929 | psmD8-1 | Q86A70 | P02889 | CUE domain-containing protein. | Probable 26S proteasome non-ATPase regulatory subunit 8; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 0.815 |
DDB_G0290491 | DDB0167929 | Q54G11 | Q86A70 | Autophagy-related protein 8-like protein DDB_G0290491. | CUE domain-containing protein. | 0.459 |
DDB_G0290491 | atg8 | Q54G11 | Q86CR8 | Autophagy-related protein 8-like protein DDB_G0290491. | Autophagy-related protein 8; Ubiquitin-like modifier involved in autophagosomes formation. Participates in membrane fusion events that take place in the secretory pathway (By similarity); Belongs to the ATG8 family. | 0.904 |
atg8 | DDB0167929 | Q86CR8 | Q86A70 | Autophagy-related protein 8; Ubiquitin-like modifier involved in autophagosomes formation. Participates in membrane fusion events that take place in the secretory pathway (By similarity); Belongs to the ATG8 family. | CUE domain-containing protein. | 0.462 |
atg8 | DDB_G0290491 | Q86CR8 | Q54G11 | Autophagy-related protein 8; Ubiquitin-like modifier involved in autophagosomes formation. Participates in membrane fusion events that take place in the secretory pathway (By similarity); Belongs to the ATG8 family. | Autophagy-related protein 8-like protein DDB_G0290491. | 0.904 |
psmD8-1 | DDB0167929 | P02889 | Q86A70 | Probable 26S proteasome non-ATPase regulatory subunit 8; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | CUE domain-containing protein. | 0.815 |