Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDB0168777 | DDB_G0281367 | Q75JS7 | Q54U15 | Uncharacterized protein. | NTF2 domain-containing protein. | 0.407 |
DDB0168777 | Nup62 | Q75JS7 | Q86IX4 | Uncharacterized protein. | Nsp1_C domain-containing protein. | 0.997 |
DDB0168777 | nup54 | Q75JS7 | Q55BX5 | Uncharacterized protein. | Nuclear pore complex protein nup54; Probable component of the nuclear pore complex, a complex required for the trafficking across the nuclear membrane. | 0.997 |
DDB0168777 | nutf2 | Q75JS7 | Q86HW7 | Uncharacterized protein. | Nuclear transport factor 2; Mediates the import of GDP-bound RAN from the cytoplasm into the nucleus which is essential for the function of RAN in cargo receptor-mediated nucleocytoplasmic transport. Thereby, plays indirectly a more general role in cargo receptor-mediated nucleocytoplasmic transport. Interacts with GDP-bound RAN in the cytosol, recruits it to the nuclear pore complex via its interaction with nucleoporins and promotes its nuclear import. | 0.935 |
DDB0168777 | ranA | Q75JS7 | P33519 | Uncharacterized protein. | GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity). | 0.793 |
DDB0168777 | ranB | Q75JS7 | Q554Y4 | Uncharacterized protein. | GTP-binding nuclear protein Ran. | 0.793 |
DDB0184539 | DDB0189872 | Q54CR0 | Q55F81 | Uncharacterized protein. | Uncharacterized protein. | 0.974 |
DDB0184539 | DDB0217507 | Q54CR0 | Q8T145 | Uncharacterized protein. | Uncharacterized protein. | 0.997 |
DDB0184539 | nutf2 | Q54CR0 | Q86HW7 | Uncharacterized protein. | Nuclear transport factor 2; Mediates the import of GDP-bound RAN from the cytoplasm into the nucleus which is essential for the function of RAN in cargo receptor-mediated nucleocytoplasmic transport. Thereby, plays indirectly a more general role in cargo receptor-mediated nucleocytoplasmic transport. Interacts with GDP-bound RAN in the cytosol, recruits it to the nuclear pore complex via its interaction with nucleoporins and promotes its nuclear import. | 0.892 |
DDB0189872 | DDB0184539 | Q55F81 | Q54CR0 | Uncharacterized protein. | Uncharacterized protein. | 0.974 |
DDB0189872 | DDB0217507 | Q55F81 | Q8T145 | Uncharacterized protein. | Uncharacterized protein. | 0.742 |
DDB0189872 | nutf2 | Q55F81 | Q86HW7 | Uncharacterized protein. | Nuclear transport factor 2; Mediates the import of GDP-bound RAN from the cytoplasm into the nucleus which is essential for the function of RAN in cargo receptor-mediated nucleocytoplasmic transport. Thereby, plays indirectly a more general role in cargo receptor-mediated nucleocytoplasmic transport. Interacts with GDP-bound RAN in the cytosol, recruits it to the nuclear pore complex via its interaction with nucleoporins and promotes its nuclear import. | 0.795 |
DDB0189872 | top3 | Q55F81 | Q8T2T7 | Uncharacterized protein. | DNA topoisomerase 3; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)- enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand than undergoes passage around the unbroken strand thus removing DNA supercoils. Fina [...] | 0.497 |
DDB0217507 | DDB0184539 | Q8T145 | Q54CR0 | Uncharacterized protein. | Uncharacterized protein. | 0.997 |
DDB0217507 | DDB0189872 | Q8T145 | Q55F81 | Uncharacterized protein. | Uncharacterized protein. | 0.742 |
DDB0217507 | nutf2 | Q8T145 | Q86HW7 | Uncharacterized protein. | Nuclear transport factor 2; Mediates the import of GDP-bound RAN from the cytoplasm into the nucleus which is essential for the function of RAN in cargo receptor-mediated nucleocytoplasmic transport. Thereby, plays indirectly a more general role in cargo receptor-mediated nucleocytoplasmic transport. Interacts with GDP-bound RAN in the cytosol, recruits it to the nuclear pore complex via its interaction with nucleoporins and promotes its nuclear import. | 0.997 |
DDB0217507 | top3 | Q8T145 | Q8T2T7 | Uncharacterized protein. | DNA topoisomerase 3; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)- enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand than undergoes passage around the unbroken strand thus removing DNA supercoils. Fina [...] | 0.997 |
DDB_G0281367 | DDB0168777 | Q54U15 | Q75JS7 | NTF2 domain-containing protein. | Uncharacterized protein. | 0.407 |
DDB_G0281367 | Nup62 | Q54U15 | Q86IX4 | NTF2 domain-containing protein. | Nsp1_C domain-containing protein. | 0.713 |
DDB_G0281367 | nup54 | Q54U15 | Q55BX5 | NTF2 domain-containing protein. | Nuclear pore complex protein nup54; Probable component of the nuclear pore complex, a complex required for the trafficking across the nuclear membrane. | 0.578 |
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