helF protein (Dictyostelium discoideum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

helF

Uncharacterized protein. (837 aa)

Predicted Functional Partners:

drnB

0.936

DDB0191671

0.916

DDB0203044

0.900

mrpl17

0.895

mrpl27

0.894

mrpl33

0.893

DDB0188832

0.891

dnmA

0.880

rps5

0.868

rps14

0.862

Your Current Organism:

Dictyostelium discoideum

NCBI taxonomy Id: 44689
Other names: D. discoideum

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDB0188832	DDB0191671	Q54G88	Q54CK4	MRP-L46 domain-containing protein.	Uncharacterized protein.	0.991
DDB0188832	DDB0203044	Q54G88	Q556W7	MRP-L46 domain-containing protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	0.967
DDB0188832	drnB	Q54G88	Q55FS1	MRP-L46 domain-containing protein.	Uncharacterized protein.	0.888
DDB0188832	helF	Q54G88	Q86L44	MRP-L46 domain-containing protein.	Uncharacterized protein.	0.891
DDB0188832	mrpl17	Q54G88	Q54TY5	MRP-L46 domain-containing protein.	Probable 39S ribosomal protein L17, mitochondrial.	0.991
DDB0188832	mrpl27	Q54G88	Q54XK0	MRP-L46 domain-containing protein.	Probable 39S ribosomal protein L27, mitochondrial.	0.995
DDB0188832	mrpl33	Q54G88	Q54YX7	MRP-L46 domain-containing protein.	Probable 39S ribosomal protein L33, mitochondrial.	0.989
DDB0188832	rps14	Q54G88	Q54EG3	MRP-L46 domain-containing protein.	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.960
DDB0188832	rps5	Q54G88	Q54MA6	MRP-L46 domain-containing protein.	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	0.977
DDB0191671	DDB0188832	Q54CK4	Q54G88	Uncharacterized protein.	MRP-L46 domain-containing protein.	0.991
DDB0191671	DDB0203044	Q54CK4	Q556W7	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	0.999
DDB0191671	drnB	Q54CK4	Q55FS1	Uncharacterized protein.	Uncharacterized protein.	0.916
DDB0191671	helF	Q54CK4	Q86L44	Uncharacterized protein.	Uncharacterized protein.	0.916
DDB0191671	mrpl17	Q54CK4	Q54TY5	Uncharacterized protein.	Probable 39S ribosomal protein L17, mitochondrial.	0.999
DDB0191671	mrpl27	Q54CK4	Q54XK0	Uncharacterized protein.	Probable 39S ribosomal protein L27, mitochondrial.	0.999
DDB0191671	mrpl33	Q54CK4	Q54YX7	Uncharacterized protein.	Probable 39S ribosomal protein L33, mitochondrial.	0.999
DDB0191671	rps14	Q54CK4	Q54EG3	Uncharacterized protein.	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.999
DDB0191671	rps5	Q54CK4	Q54MA6	Uncharacterized protein.	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	0.999
DDB0203044	DDB0188832	Q556W7	Q54G88	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	MRP-L46 domain-containing protein.	0.967
DDB0203044	DDB0191671	Q556W7	Q54CK4	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	Uncharacterized protein.	0.999