STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cotESpore coat protein SP65; Forms a triad with cellulose and pspB that is essential for spore outer layer formation. (464 aa)    
Predicted Functional Partners:
DDB0168777
Uncharacterized protein.
   
 
 0.997
Nup62
Nsp1_C domain-containing protein.
   
 
 0.997
helC
ATP-dependent RNA helicase ddx19; ATP-binding RNA helicase required for normal differentiation and development.
    
 
 0.992
Nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 
 0.990
DDB0215314
Uncharacterized protein.
    
 
 0.980
Nup133
Uncharacterized protein.
   
 
 0.976
gle1
Nucleoporin GLE1; Required for the export of mRNAs containing poly(A) tails from the nucleus into the cytoplasm. May be involved in the terminal step of the mRNA transport through the nuclear pore complex (NPC) (By similarity).
    
 
 0.975
Nup93
Nuclear pore protein.
    
 
 0.975
nup85
Nuclear pore complex protein nup85; Component of the nuclear pore complex, a complex required for the trafficking across the nuclear membrane; Belongs to the nucleoporin Nup85 family.
    
 
 0.972
DDB0169145
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
    
 
 0.965
Your Current Organism:
Dictyostelium discoideum
NCBI taxonomy Id: 44689
Other names: D. discoideum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.