STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lboz_0002Hypothetical protein. (105 aa)    
Predicted Functional Partners:
Lboz_2292
GNAT family acetyltransferase.
 
   
  0.916
Lboz_1998
GNAT family acetyltransferase.
 
      0.896
Lboz_1367
Sensory box histidine kinase/response regulator.
  
 
 0.869
Lboz_3600
Sensory box histidine kinase/response regulator.
 
 
 0.866
Lboz_2549
Sensory histidine-kinase / response regulator.
  
 
 0.846
Lboz_0101
Sensor histidine kinase.
  
 
 0.793
cpxR_1
Transcriptional regulatory protein CpxR.
  
  
  0.773
ompR
DNA-binding response regulator in two-component regulatory system with EnvZ.
  
  
  0.773
lrpR
DNA-binding response regulator.
  
  
  0.773
cpxR_4
Transcriptional regulatory protein CpxR.
  
  
  0.772
Your Current Organism:
Fluoribacter bozemanae
NCBI taxonomy Id: 447
Other names: ATCC 33217, CIP 103872, DSM 16523, F. bozemanae, Fluoribacter bozemaniae, Legionella bozemaniae, Legionella bozemanii, NCTC 11368, strain ALLO1, strain WIGA
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.