STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lboz_0100D-Ala-D-Ala carboxypeptidase. (470 aa)    
Predicted Functional Partners:
Lboz_0884
LD-carboxypeptidase.
 
  
  0.817
Lboz_2671
Muramoyltetrapeptide carboxypeptidase.
 
  
  0.811
Lboz_0098
SH3 domain of the SH3b1 type.
    
  0.743
Lboz_0099
Conserved protein of unknown function.
    
  0.719
enhA_3
Enhanced entry protein EnhA.
  
  
  0.685
Lboz_1606
Enhanced entry protein EnhA.
  
  
  0.679
Lboz_2794
Hypothetical protein.
  
  
  0.677
rodA
Rod shape-determining protein rodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
     
 0.638
Lboz_2424
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase.
  
  
 
0.634
enhA_1
Enhanced entry protein EnhA.
  
  
  0.595
Your Current Organism:
Fluoribacter bozemanae
NCBI taxonomy Id: 447
Other names: ATCC 33217, CIP 103872, DSM 16523, F. bozemanae, Fluoribacter bozemaniae, Legionella bozemaniae, Legionella bozemanii, NCTC 11368, strain ALLO1, strain WIGA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.