Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lboz_02003-hydroxyacyl CoA dehydrogenase. (284 aa)    
Predicted Functional Partners:
paaF
enoyl-CoA hydratase.
 0.994
fadA
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.989
Lboz_1462
enoyl-CoA hydratase.
 0.986
atoB
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.970
yfcY
beta-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.960
Lboz_0201
Acyl CoA dehydrogenase.
 0.940
Lboz_1985
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.904
gcdH
glutaryl-CoA dehydrogenase.
 0.873
Lboz_2442
acyl-CoA dehydrogenase.
 
 0.823
acdA
Acyl CoA dehydrogenase.
 0.818
Your Current Organism:
Fluoribacter bozemanae
NCBI taxonomy Id: 447
Other names: ATCC 33217, CIP 103872, DSM 16523, F. bozemanae, Fluoribacter bozemaniae, Legionella bozemaniae, Legionella bozemanii, NCTC 11368, strain ALLO1, strain WIGA
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