STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lboz_0204Coenzyme F390 synthetase. (496 aa)    
Predicted Functional Partners:
Lboz_1038
Phenylacetate-coenzyme A ligase.
  
     0.736
mmsA
Methylmalonate-semialdehyde dehydrogenase [acylating] (MMSDH), oxidoreductase.
 
 
  0.647
Lboz_1860
Xylene monooxygenase.
    
 0.626
yneI
Aldehyde dehydrogenase.
   
  0.590
Lboz_0513
Aldehyde dehydrogenase.
   
  0.590
Lboz_1523
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  0.590
Lboz_1622
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  0.590
astD
Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
   
  0.590
ywdH
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  0.590
gbsA
Glycine betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  0.590
Your Current Organism:
Fluoribacter bozemanae
NCBI taxonomy Id: 447
Other names: ATCC 33217, CIP 103872, DSM 16523, F. bozemanae, Fluoribacter bozemaniae, Legionella bozemaniae, Legionella bozemanii, NCTC 11368, strain ALLO1, strain WIGA
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.