STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lvhB_3Vir protein B5. (237 aa)    
Predicted Functional Partners:
Lboz_0714
Hypothetical protein.
   
 0.956
lvhB_2
Vir protein.
    
 0.844
lvhB_6
Vir protein.
    
 0.806
Lboz_0718
Hypothetical protein; Part of the Type IV secretion system. Belongs to the GSP E family.
    
 0.804
Lboz_0717
Hypothetical protein.
    
 0.749
Lboz_0715
Hypothetical protein.
     
 0.589
lvrD
LvrD.
       0.532
lvhD
Vir protein.
     
 0.518
Lboz_1011
Protein IcmE (DotG).
    
 0.517
lvhB_1
Vir protein.
       0.480
Your Current Organism:
Fluoribacter bozemanae
NCBI taxonomy Id: 447
Other names: ATCC 33217, CIP 103872, DSM 16523, F. bozemanae, Fluoribacter bozemaniae, Legionella bozemaniae, Legionella bozemanii, NCTC 11368, strain ALLO1, strain WIGA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.