Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lboz_0525 | Lboz_0732 | Lboz_0525 | Lboz_0732 | Metal ion transporter. | Hypothetical protein. | 0.432 |
| Lboz_0732 | Lboz_0525 | Lboz_0732 | Lboz_0525 | Hypothetical protein. | Metal ion transporter. | 0.432 |
| Lboz_0732 | Lboz_1537 | Lboz_0732 | Lboz_1537 | Hypothetical protein. | Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.503 |
| Lboz_0732 | flgD | Lboz_0732 | Lboz_1151 | Hypothetical protein. | Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein. | 0.503 |
| Lboz_0732 | flgI | Lboz_0732 | Lboz_1146 | Hypothetical protein. | Flagellar P-ring protein (precursor) FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.503 |
| Lboz_0732 | flgK | Lboz_0732 | Lboz_1144 | Hypothetical protein. | Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. | 0.503 |
| Lboz_1537 | Lboz_0732 | Lboz_1537 | Lboz_0732 | Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Hypothetical protein. | 0.503 |
| Lboz_1537 | flgD | Lboz_1537 | Lboz_1151 | Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein. | 0.987 |
| Lboz_1537 | flgI | Lboz_1537 | Lboz_1146 | Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Flagellar P-ring protein (precursor) FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.981 |
| Lboz_1537 | flgK | Lboz_1537 | Lboz_1144 | Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. | 0.987 |
| flgD | Lboz_0732 | Lboz_1151 | Lboz_0732 | Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein. | Hypothetical protein. | 0.503 |
| flgD | Lboz_1537 | Lboz_1151 | Lboz_1537 | Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.987 |
| flgD | flgI | Lboz_1151 | Lboz_1146 | Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar P-ring protein (precursor) FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.998 |
| flgD | flgK | Lboz_1151 | Lboz_1144 | Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. | 0.990 |
| flgI | Lboz_0732 | Lboz_1146 | Lboz_0732 | Flagellar P-ring protein (precursor) FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | Hypothetical protein. | 0.503 |
| flgI | Lboz_1537 | Lboz_1146 | Lboz_1537 | Flagellar P-ring protein (precursor) FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.981 |
| flgI | flgD | Lboz_1146 | Lboz_1151 | Flagellar P-ring protein (precursor) FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein. | 0.998 |
| flgI | flgK | Lboz_1146 | Lboz_1144 | Flagellar P-ring protein (precursor) FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. | 0.991 |
| flgK | Lboz_0732 | Lboz_1144 | Lboz_0732 | Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. | Hypothetical protein. | 0.503 |
| flgK | Lboz_1537 | Lboz_1144 | Lboz_1537 | Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. | Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.987 |
page 1 of 2