STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lboz_0736Glycosyl hydrolase family 81. (1003 aa)    
Predicted Functional Partners:
Lboz_2612
Chitinase.
 
  
 0.937
glcA
Glucan endo-1,3-beta-glucosidase A1 precursor.
 
   
 0.803
chiA
Chitinase A precursor.
  
  
 0.743
Lboz_3143
Glycosyl hydrolase family 18; Belongs to the glycosyl hydrolase 18 family.
    
 0.712
Lboz_1774
Hypothetical protein.
    
 0.592
Lboz_1410
N-acetyl-beta-glucosaminidase.
 
  
  0.584
Lboz_2591
Glycosyl hydrolase.
 
  
  0.584
Lboz_0735
Hypothetical protein.
       0.576
nagZ
Beta N-acetyl-glucosaminidase.
 
  
  0.571
bcsA
Cellulose synthase catalytic UDP-forming subunit; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.
  
 
 0.497
Your Current Organism:
Fluoribacter bozemanae
NCBI taxonomy Id: 447
Other names: ATCC 33217, CIP 103872, DSM 16523, F. bozemanae, Fluoribacter bozemaniae, Legionella bozemaniae, Legionella bozemanii, NCTC 11368, strain ALLO1, strain WIGA
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