STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sdhSerine 3-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (257 aa)    
Predicted Functional Partners:
Lboz_0116
Saframycin Mx1 synthetase B.
 
 0.933
Lboz_1856
Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.932
Lboz_0202
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.921
Lboz_1213
Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.921
Lboz_0093
Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family.
   
  0.864
Lboz_0102
Polyketide synthase.
  
 
 0.827
pksJ_2
Polyketide synthase, type I.
 
 
 0.814
Lboz_0395
Polyketide synthase.
 
 0.768
Lboz_2386
Methoxymalonyl CoA synthase.
  
 
 0.756
Lboz_2384
Polyketide synthase.
 
 
 0.742
Your Current Organism:
Fluoribacter bozemanae
NCBI taxonomy Id: 447
Other names: ATCC 33217, CIP 103872, DSM 16523, F. bozemanae, Fluoribacter bozemaniae, Legionella bozemaniae, Legionella bozemanii, NCTC 11368, strain ALLO1, strain WIGA
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.