STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lboz_0945Endonuclease/exonuclease/phosphatase family protein. (255 aa)    
Predicted Functional Partners:
sufS
Selenocysteine lyase, PLP-dependent; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.821
Lboz_1037
Aminotransferase class V.
    
   0.821
Lboz_2339
Methyl-transferase.
  
     0.582
Lboz_1705
Diacylglycerol kinase.
  
 
  0.568
Lboz_0946
Lipase LipA (L, pneumophila).
       0.540
Lboz_1954
Putative lipoprotein.
  
    0.506
gshA
Glutamate--cysteine ligase.
 
     0.470
Lboz_1955
Hemolysin, lipoprotein.
  
    0.458
Lboz_2612
Chitinase.
  
 
  0.438
Your Current Organism:
Fluoribacter bozemanae
NCBI taxonomy Id: 447
Other names: ATCC 33217, CIP 103872, DSM 16523, F. bozemanae, Fluoribacter bozemaniae, Legionella bozemaniae, Legionella bozemanii, NCTC 11368, strain ALLO1, strain WIGA
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