Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lboz_0151 | Lboz_0152 | Lboz_0151 | Lboz_0152 | 2-methylcitrate synthase. | Chorismate mutase. | 0.950 |
| Lboz_0151 | aroA | Lboz_0151 | Lboz_2174 | 2-methylcitrate synthase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.952 |
| Lboz_0151 | aroB | Lboz_0151 | Lboz_2826 | 2-methylcitrate synthase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.805 |
| Lboz_0151 | aroC | Lboz_0151 | Lboz_3282 | 2-methylcitrate synthase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.944 |
| Lboz_0151 | aroE | Lboz_0151 | Lboz_1283 | 2-methylcitrate synthase. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.831 |
| Lboz_0151 | aroK | Lboz_0151 | Lboz_2825 | 2-methylcitrate synthase. | Shikimate kinase I; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.702 |
| Lboz_0151 | aroQ | Lboz_0151 | Lboz_0949 | 2-methylcitrate synthase. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.718 |
| Lboz_0151 | pabB | Lboz_0151 | Lboz_0058 | 2-methylcitrate synthase. | Para-aminobenzoate synthase, component I. | 0.604 |
| Lboz_0151 | trpE | Lboz_0151 | Lboz_1670 | 2-methylcitrate synthase. | Anthranilate synthase. | 0.826 |
| Lboz_0151 | trpG | Lboz_0151 | Lboz_0475 | 2-methylcitrate synthase. | Anthranilate synthase component II. | 0.603 |
| Lboz_0152 | Lboz_0151 | Lboz_0152 | Lboz_0151 | Chorismate mutase. | 2-methylcitrate synthase. | 0.950 |
| Lboz_0152 | aroA | Lboz_0152 | Lboz_2174 | Chorismate mutase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.806 |
| Lboz_0152 | aroB | Lboz_0152 | Lboz_2826 | Chorismate mutase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.830 |
| Lboz_0152 | aroC | Lboz_0152 | Lboz_3282 | Chorismate mutase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.829 |
| Lboz_0152 | aroE | Lboz_0152 | Lboz_1283 | Chorismate mutase. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.836 |
| Lboz_0152 | aroK | Lboz_0152 | Lboz_2825 | Chorismate mutase. | Shikimate kinase I; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.604 |
| Lboz_0152 | aroQ | Lboz_0152 | Lboz_0949 | Chorismate mutase. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.528 |
| Lboz_0152 | pabB | Lboz_0152 | Lboz_0058 | Chorismate mutase. | Para-aminobenzoate synthase, component I. | 0.661 |
| Lboz_0152 | trpE | Lboz_0152 | Lboz_1670 | Chorismate mutase. | Anthranilate synthase. | 0.825 |
| Lboz_0152 | trpG | Lboz_0152 | Lboz_0475 | Chorismate mutase. | Anthranilate synthase component II. | 0.669 |
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