STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lboz_1820Hypothetical protein. (241 aa)    
Predicted Functional Partners:
ankH
Ankyrin repeat-containing protein H.
  
     0.761
amiB
N-acetylmuramoyl-L-alanine amidase.
    
 0.745
dotA
Defect in organelle trafficking protein DotA.
  
     0.741
Lboz_1016
Protein IcmO (DotL).
  
     0.739
Lboz_1011
Protein IcmE (DotG).
  
     0.737
Lboz_2424
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase.
  
  
  0.605
Lboz_0974
Transmembrane protein.
  
     0.587
ftsI
Transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3); Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily.
  
  
  0.561
Lboz_1355
Coiled-coil protein.
  
     0.550
Lboz_1330
Putative helicase/relaxase.
  
     0.517
Your Current Organism:
Fluoribacter bozemanae
NCBI taxonomy Id: 447
Other names: ATCC 33217, CIP 103872, DSM 16523, F. bozemanae, Fluoribacter bozemaniae, Legionella bozemaniae, Legionella bozemanii, NCTC 11368, strain ALLO1, strain WIGA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.