STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lboz_1998GNAT family acetyltransferase. (171 aa)    
Predicted Functional Partners:
Lboz_2292
GNAT family acetyltransferase.
 
     0.967
Lboz_0002
Hypothetical protein.
 
      0.896
Lboz_1997
Methyltransferase, ubiE/COQ5 family.
 
     0.781
aph
Spectinomycin phosphotransferase.
  
     0.768
Lboz_1999
Lipolytic protein.
       0.752
Lboz_3536
Hypothetical protein.
   
   0.716
grpB
Glutamate rich protein GrpB.
 
    0.685
Lboz_1996
Phosphotransferase enzyme family protein.
 
     0.627
Lboz_0128
Hypothetical protein.
  
     0.483
Lboz_0127
Integral membrane protein (PIN domain superfamily).
  
     0.480
Your Current Organism:
Fluoribacter bozemanae
NCBI taxonomy Id: 447
Other names: ATCC 33217, CIP 103872, DSM 16523, F. bozemanae, Fluoribacter bozemaniae, Legionella bozemaniae, Legionella bozemanii, NCTC 11368, strain ALLO1, strain WIGA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.