STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lboz_2008Flavin reductase like domain protein. (211 aa)    
Predicted Functional Partners:
asnO
L-asparagine oxygenase.
    
  0.827
Lboz_2007
Amino acid racemase.
       0.798
Lboz_1860
Xylene monooxygenase.
  
 
 0.785
Lboz_2005
Phosphoribosylglycinamide synthetase ATP-grasp (A) domain protein.
       0.785
Lboz_2006
Hypothetical protein.
       0.785
Lboz_2004
Major facilitator superfamily (MFS) transporter.
       0.773
Lboz_0102
Polyketide synthase.
    
 0.731
Lboz_2386
Methoxymalonyl CoA synthase.
    
 0.685
pksJ_4
Polyketide synthase, type I.
    
  0.685
ribF
Riboflavin biosynthesis protein RibF (riboflavin kinase/FMN adenylyltransferase); Belongs to the ribF family.
    
  0.674
Your Current Organism:
Fluoribacter bozemanae
NCBI taxonomy Id: 447
Other names: ATCC 33217, CIP 103872, DSM 16523, F. bozemanae, Fluoribacter bozemaniae, Legionella bozemaniae, Legionella bozemanii, NCTC 11368, strain ALLO1, strain WIGA
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