STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lspKType II secretory pathway protein LspK. (313 aa)    
Predicted Functional Partners:
lspJ
Type II secretory pathway protein LspJ.
 
 
 0.998
lspI
Type II secretory pathway protein LspI.
 
 
 0.998
lspH
Type II secretory pathway protein LspH.
 
 
 0.991
lspG
Type II secretory pathway protein LspG.
 
 
 0.990
lspF
Type II secretory pathway protein LspF.
 
   
 0.878
lspD
Type II protein secretion LspD.
 
   
 0.870
Lboz_1189
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
  
 0.834
Lboz_0413
Hypothetical protein.
  
 
 0.777
Lboz_1803
Protein TraN.
  
 
 0.777
Lboz_2990
Conjugative transfer protein TraN.
  
 
 0.777
Your Current Organism:
Fluoribacter bozemanae
NCBI taxonomy Id: 447
Other names: ATCC 33217, CIP 103872, DSM 16523, F. bozemanae, Fluoribacter bozemaniae, Legionella bozemaniae, Legionella bozemanii, NCTC 11368, strain ALLO1, strain WIGA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.