STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilZ_2Type 4 fimbrial biogenesis protein PilZ. (113 aa)    
Predicted Functional Partners:
Lboz_2227
Regulatory protein (EAL domain).
    
   0.893
pilB
Pilus assembly protein PilB.
  
 
 
 0.858
Lboz_0101
Sensor histidine kinase.
    
 
 0.845
pilM
Tfp pilus assembly protein, ATPase PilM.
  
   
 0.836
lspE
Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
    
 
 0.822
letS_1
Legionella transmission sensor LetS.
    
  0.813
Lboz_2840
Two component response regulator with GGDEF domain protein.
    
  0.813
Lboz_3602
Regulatory protein (GGDEF domain).
    
  0.813
pilO
Tfp pilus assembly protein PilO.
  
   
 0.807
pilP
Tfp pilus assembly protein PilP.
  
   
 0.807
Your Current Organism:
Fluoribacter bozemanae
NCBI taxonomy Id: 447
Other names: ATCC 33217, CIP 103872, DSM 16523, F. bozemanae, Fluoribacter bozemaniae, Legionella bozemaniae, Legionella bozemanii, NCTC 11368, strain ALLO1, strain WIGA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.