STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lboz_2408Conjugal transfer mating pair stabilization protein TraN. (117 aa)    
Predicted Functional Partners:
msrA_1
Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.983
traW_2
Type-F conjugative transfer system protein.
 
     0.782
Lboz_2991
Conjugal pilus assembly protein TraF.
 
     0.781
Lboz_3038
Conjugal pilus assembly protein TraF.
 
     0.781
traW_3
Type-F conjugative transfer system protein.
 
     0.781
Lboz_3039
Conjugative transfer protein.
 
     0.779
Lboz_1805
Protein TraU.
 
     0.777
Lboz_2988
Conjugative transfer protein TraU.
 
     0.777
Lboz_3004
Putative conjugative transfer protein TraU.
 
     0.777
Lboz_3035
Conjugative transfer protein TraU.
 
     0.777
Your Current Organism:
Fluoribacter bozemanae
NCBI taxonomy Id: 447
Other names: ATCC 33217, CIP 103872, DSM 16523, F. bozemanae, Fluoribacter bozemaniae, Legionella bozemaniae, Legionella bozemanii, NCTC 11368, strain ALLO1, strain WIGA
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